docs: reorganize into design, security, api, ops and dev; drop stale designs; refresh the diagrams [CI]

- Group docs by category with an index (docs/README.md); fix every link,
  code comment and the protocol conformance test that read docs/protocol.md.
- access.md and security.md rewritten to what is implemented: removed the
  unadopted member-proof chain, roles and recovery key that do not exist,
  the old implementation order and the budgets; gaps now carry a status.
- enrollment, deployment, api: the install flow is the static, hash-checked
  script with environment variables; no default admin.
- README and architecture: new topology and update-flow diagrams (operator
  passkey, CI signing, registry feed, auth and trust modules).

backend/probe/README.md

@@ -13,7 +13,7 @@ Backend ──任务──> Agent <──测量会话──> Probe
 
 Probe 用 `probe.json` 读取面板地址（`fleet.server`）、身份目录（`fleet.identity_dir`，由 `fleet-enroll` 注册时生成）和本地测试限制。连上面板之后，面板下发要连接的 Agent 列表；Probe 将列表缓存到同目录的 `agents.json`，面板暂时连不上时靠它继续测量。身份目录里有私钥，请限制访问权限，不要提交到版本控制。
 
-容器节点的运行方式（podman + systemd）和宿主机更新器见 [`../../docs/deployment.md`](../../docs/deployment.md)；Probe 也可以用 OCI 镜像 `registry.oeo.one/moshiro/moshiro-probe:<version>`，容器默认读取 `/etc/moshiro/probe.json`，命名 volume 保存身份配置和缓存，镜像以 UID/GID 1654 运行。
+容器节点的运行方式（podman + systemd）和宿主机更新器见 [`../../docs/ops/deployment.md`](../../docs/ops/deployment.md)；Probe 也可以用 OCI 镜像 `registry.oeo.one/moshiro/moshiro-probe:<version>`，容器默认读取 `/etc/moshiro/probe.json`，命名 volume 保存身份配置和缓存，镜像以 UID/GID 1654 运行。
 
 ## 构建
 
@@ -30,7 +30,7 @@ dotnet build probe/src/MoShiro.Probe -c Release
 dotnet publish probe/src/MoShiro.Probe -c Release -r <RID> -p:PublishAot=true
 ```
 
-也可在仓库根目录运行 `bash scripts/publish.sh probe <RID>`，再使用 `scripts/package.sh probe <RID>` 生成部署包。支持平台和安装流程见 [`../../docs/deployment.md`](../../docs/deployment.md)。
+也可在仓库根目录运行 `bash scripts/publish.sh probe <RID>`，再使用 `scripts/package.sh probe <RID>` 生成部署包。支持平台和安装流程见 [`../../docs/ops/deployment.md`](../../docs/ops/deployment.md)。
 
 ## 配置与运行
 
@@ -54,6 +54,6 @@ moshiro-probe --config /etc/moshiro/probe.json
 
 - Probe 只执行编译进程序的测量模块。它不落盘测量数据，也不能执行命令或自行更新（更新由宿主机上的更新器完成，Probe 只写清单和请求文件）。
 - 测量模块由 `backend/shared/MoShiro.Measurement/` 与 Agent 共用；Probe 负责发起连接、调度任务和记录本端数据。
-- 测量模型和协议细节见 [`../../docs/measurement.md`](../../docs/measurement.md) 与 [`../../docs/protocol.md`](../../docs/protocol.md)；整体架构见 [`../../docs/architecture.md`](../../docs/architecture.md)。
+- 测量模型和协议细节见 [`../../docs/design/measurement.md`](../../docs/design/measurement.md) 与 [`../../docs/design/protocol.md`](../../docs/design/protocol.md)；整体架构见 [`../../docs/design/architecture.md`](../../docs/design/architecture.md)。
 
 Docker 与 rootless/rootful Podman 共用 `packaging/compose/probe/compose.yaml`，配置、身份和缓存放在命名 volume 中，无需宿主配置目录、keep-id 或手动 chown。首次导入和自动更新见部署文档。